Plot selector — plot_selector • aquarius

Plot an interactive DimPlot or FeaturePlot to identify cells. If no ggplot object is provided, the function builds it. Otherwise, it makes interactive the provided ggplot object with the information from the Seurat object.

Usage

plot_selector(
  sobj = NULL,
  ggobj = NULL,
  info_to_plot = "orig.ident",
  info_to_read = "orig.ident",
  ...
)

Arguments

sobj: A Seurat object (mandatory)
ggobj: A ggplot object (facultative)
info_to_plot: CHARACTER : something to color cells by. Used only if ggobj is not null (default to 'orig.ident')
info_to_read: CHARACTER : a character vector with informations to read when selecting a cell (default to 'orig.ident')
...: other parameters for DimPlot or FeaturePlot, such as cols, slot, assay, reduction, pt.size...

Value

This function returns a plot.