This function is used to read the output tables from inferCNV.
Usage
read_infercnv(path, what = "obs")
Arguments
- path
CHARACTER : pathway where infercnv stored all the outputs (no default)
- what
CHARACTER : load the observations 'obs' or the reference 'ref' ? (default to 'obs')
Value
A matrix containing the CNV for each gene. A loss of copies is < 0 while a gain of copies is > 0.
