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Plot doublet composition

plot_doublets_composition.Rd

If the Seurat object contains the doublet cells annotation and scores associated with cell type annotation, it could be interesting to estimate the doublet cells composition.

Usage

plot_doublets_composition(
  sobj,
  score1,
  score2 = score1,
  doublet_annotation = "doublets_consensus.class"
)

Arguments

sobj

A Seurat object (no default)

score1

CHARACTER : a column of sobj@meta.data corresponding to a numerical value (no default)

score2

CHARACTER : a column of sobj@meta.data corresponding to a numerical value (default to "score1")

doublet_annotation

CHARACTER : a column of sobj@meta.data corresponding to the doublet annotation (default to "doublets_consensus.class")

Value

A ggplot2 object